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SRX7563854: RNA-seq of Vibrio parahaemolyticus RIMD 2210633: deltavscF-1
1 ILLUMINA (Illumina HiSeq 2500) run: 51.9M spots, 15.6G bases, 5Gb downloads

Design: constructed using NEBNext Ultra Directional RNA Library Prep Kit for Illumina (NEB, Ipswich, MA, USA) after removal of ribosomal RNA by Ribo-Minus kit (Illumina)
Submitted by: Nanjing Agricultural University
Study: Vibrio parahaemolyticus RIMD 2210633 Raw sequence reads
PRJNA601057 • SRP241964 • All experiments • All runs
show Abstracthide Abstract
In the present study, we used NGS to characterise mRNA-seq of wild type and VscF-deletion mutant type Vibrio parahaemolyticus strains to elucidate the molecular mechanism of VscF. We want to identified a certain amount of VscF-related differential expressed mRNAs to elucidate the role of VscF in pathogenesis of V.parahaemolyticus interacts with its host.
Sample: mutant type
SAMN13841021 • SRS6000988 • All experiments • All runs
Organism: Vibrio parahaemolyticus RIMD 2210633
Library:
Name: deltavscF-1
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Inverse rRNA
Layout: PAIRED
Runs: 1 run, 51.9M spots, 15.6G bases, 5Gb
Run# of Spots# of BasesSizePublished
SRR1089491951,912,09815.6G5Gb2020-01-15

ID:
9880235

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